<Configuration params="no" database="no" >

<Main>
  <title>Electron Tomography Alignment and Reconstruction</title>
  <image>pics/mito.gif</image>
  <helpurl>file:/net/bali/usr1/spider/docs/techs/lgstr/tomo/tomo.html</helpurl>
</Main>

<Locations>
  <location>/net/bali/usr1/spider/docs/techs/recon/newprogs</location>
  <location>/mnt/common/spider/docs/techs/recon/newprogs</location>
</Locations>

<Dialogs>
  <dialog>
  <name>Alignment</name>
  <title>Particle Alignment</title>
  <dir>Alignment</dir>
  <help>http://www.wadsworth.org/spider_doc/spider/docs/techs/recon/mr.html#MQ</help>
    <button>
      <label>Create references</label>
      <buttontext>refproj.spi</buttontext>
      <proc>refproj.spi</proc>
    </button>
    <button>
      <label>open web</label>
      <buttontext>web</buttontext>
      <prog>web</prog>
    </button>
    <group name="Get alignment parameters - choose one:">
    <button>
      <label>Align particles to references</label>
      <buttontext>apmq.spi</buttontext>
      <proc>apmq.spi</proc>
    </button>
    <button>
      <label>Align particles using PubSub</label>
      <buttontext>pub_apmq.spi</buttontext>
      <proc>pub_apmq.spi</proc>
    </button>
    </group>
    <button>
      <label>Create the aligned images</label>
      <buttontext>align.spi</buttontext>
      <proc>combine.spi, align.spi</proc>
    </button>
  </dialog>
</Dialogs>

<Directories>
<dir name="."/>
<dir name="Alignment">
refproj.spi,refprojctf.spi,sel_by_group.spi,apsh.spi,apshctf.spi,pub_apsh.spi,pub_apshctf.spi,combine.spi,alignsh.spi,    <dir name="ali"/>
    <dir name="prj"/>
</dir>
</Directories>
</Configuration>
