; Creates average and variance images
;
; SOURCE: Display.spi
;
; PURPOSE: Creates a large circular plot (a SPIDER image) containing smaller
; circles representing the 83 angular groups. The radii of the 83 small
; circles are proportional to the number of particles in each group.
;
; This batch files creates displays for all defocus groups.
; I/O PARAMETERS AND FILES ARE SET HERE:
[type] = 1 ; 1 = put projection numbers in display
; 0 = don't put in numbers
; -1 = numbers only, no circles!
[back] = 1 ; 1 = white background, 0 = black background
; ------------ Input files ---------------------------------------
FR G
[refangles]../Alignment/refangles ; Doc file of the 83 angles
FR G
[defgrps]sel_group ; Defocus groups selection file
FR G
[how_many]how_many ; Number of particles per projection
; --------------- Output files -----------------------------------
FR G
[displaydir]display ; Directory for output files
FR G
[display]cndis ; Output plot images
; -------------- END BATCH HEADER ---------------------------------
VM
mkdir -p [displaydir]
UD N,[numgrps] ; Get number of groups
[defgrps] ; Group selection doc file (input)
DO LB1 [numgrp]=1,[numgrps] ; Loop over all defocus group(s)
UD IC [numgrp],[grp] ; Get current defocus group number
[defgrps]
@display_p[[type],[back]]
[refangles] ; Reference angles file
df{***[grp]}/[how_many] ; Doc file of particles per projection
[displaydir]/[display]{***[grp]} ; Output files
LB1
; Put sum of all defocus groups in output file000
[grp] = 0
@display_p[[type],[back]]
[refangles]
[how_many] ; Overall no. of particles / projection
[displaydir]/[display]{***[grp]} ; Output file
VM
echo " Created circular plots [displaydir]/[display]*** of projection angles"
VM
echo ' '
EN
;