Adenovirus | X | X | X | X | NPS or combined NPS/OPS | URS, CSF, rectal swabs, stool, and urine | |
Coronavirus (NL63, OC43, HKU1, 229E) | X¥ | | X**¥ | | NPS or combined NPS/OPS | URS and LRS | |
Cytomegalovirus | X | | | X | Bronchial wash or NPS | Blood, bronchial wash, CSF, URS, and urine | |
Enterovirus (all serotypes, including coxsackievirus and echovirus) | X | X | | X | NPS or combined NPS/OPS | URS, CSF, rectal swabs, and stool | |
Human metapneumovirus | X | | X | | NPS or combined NPS/OPS, BAL or sputum | URS and LRS | |
Human parechovirus | X¥ | X | | X | NPS or combined NPS/OPS | URS, CSF, and stool | |
Influenza A virus (human, seasonal) | X | X | X | X | NPS or combined NPS/OPS, BAL or sputum | URS, LRS, lung tissue, and cultured viral isolates | |
Influenza A virus (novel) | X | X | | | NPS or combined NPS/OPS, BAL or sputum | URS, LRS, and lung tissue | Requires prior approval to submit |
Influenza B virus | X | X | X | X | NPS or combined NPS/OPS, BAL or sputum | URS, LRS, lung tissue, and cultured viral isolates | |
MERS - coronavirus | X | | | | BAL or sputum, NPS or combined NPS/OPS and serum | BAL or sputum, NPS or combined NPS/OPS, serum, and stool | Requires prior approval to submit |
Parainfluenza virus (1, 2, 3) | X¥ | | X | X | NPS or combined NPS/OPS | URS, and LRS | |
Parainfluenza virus 4 | X¥ | | X**¥ | X | NPS or combined NPS/OPS | URS, and LRS | |
SARS - coronavirus | X | | | | BAL or sputum, NPS or combined NPS/OPS, serum and stool | BAL or sputum, NPS or Combined NPS/OPS, serum, and stool | Requires prior approval to submit |
Respiratory syncytial virus | X¥ | X | X | X | NPS or combined NPS/OPS | URS, and LRS | |
Rhinovirus | X | X | X | X | NPS or combined NPS/OPS | URS, and cultured viral isolates | |